TSS: Hg 100990.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=-12185 |entrez_id=216 |gc_percent=0.517413 |gene_alias=ALDC|ALDH-E1|ALDH1|ALDH11|HEL-9|HEL-S-53e|HEL12|PUMB1|RALDH1 |gene_descr...") |
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{{TSSDetail | {{TSSDetail | ||
|ALDH-E1= | |||
|ALDH1= | |||
|ALDH11= | |||
|HEL-9= | |||
|HEL-S-53e= | |||
|HEL12= | |||
|PUMB1= | |||
|RALDH1= | |||
|chr=chr9 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance= | |||
|distance_to_tss=-12185 | |distance_to_tss=-12185 | ||
|end=72965509 | |||
|entrez_id=216 | |entrez_id=216 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| Line 12: | Line 23: | ||
|nearest_refseq=NM_000689 | |nearest_refseq=NM_000689 | ||
|nearest_unigene=Hs.76392 | |nearest_unigene=Hs.76392 | ||
|num_trans=0 | |||
|species=human | |||
|start=72965494 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100990.1 | |tss_id=hg_100990.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:24, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -12185 |
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| Nearest PromoterID: | NM_000689 |
| Entrez ID: | 216 |
| Nearest Unigene: | Hs.76392 |
| Nearest Refseq: | NM_000689 |
| Nearest Ensembl: | ENSG00000165092 |
| Gene Name: | ALDH1A1 |
| Gene Alias: | ALDC |
| Gene Description: | aldehyde dehydrogenase 1 family member A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |