TSS: Hg 100991.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=-12202 |entrez_id=216 |gc_percent=0.537313 |gene_alias=ALDC|ALDH-E1|ALDH1|ALDH11|HEL-9|HEL-S-53e|HEL12|PUMB1|RALDH1 |gene_descr...") |
No edit summary |
||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|ALDH-E1= | |||
|ALDH1= | |||
|ALDH11= | |||
|HEL-9= | |||
|HEL-S-53e= | |||
|HEL12= | |||
|PUMB1= | |||
|RALDH1= | |||
|chr=chr9 | |||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance= | |||
|distance_to_tss=-12202 | |distance_to_tss=-12202 | ||
|end=72965526 | |||
|entrez_id=216 | |entrez_id=216 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
| Line 12: | Line 23: | ||
|nearest_refseq=NM_000689 | |nearest_refseq=NM_000689 | ||
|nearest_unigene=Hs.76392 | |nearest_unigene=Hs.76392 | ||
|num_trans=0 | |||
|species=human | |||
|start=72965511 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100991.1 | |tss_id=hg_100991.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:24, 8 March 2018
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | -12202 |
|---|---|
| Nearest PromoterID: | NM_000689 |
| Entrez ID: | 216 |
| Nearest Unigene: | Hs.76392 |
| Nearest Refseq: | NM_000689 |
| Nearest Ensembl: | ENSG00000165092 |
| Gene Name: | ALDH1A1 |
| Gene Alias: | ALDC |
| Gene Description: | aldehyde dehydrogenase 1 family member A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |