TSS: Mm 143247.1: Difference between revisions
From referenceTSS
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|AL022700= | |AL022700= | ||
|Neurodap1= | |Neurodap1= | ||
|all_trans= | |all_trans=MGI:2159342 | ||
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_144859 | |nearest_refseq=NM_144859 | ||
|nearest_unigene=Mm.489681 | |nearest_unigene=Mm.489681 | ||
|num_trans= | |num_trans=224938 | ||
|species=mouse | |species=mouse | ||
|start=64331817 | |start=64331817 | ||
|start_of_center_position=64331887 | |start_of_center_position=64331887 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000172818.7 ENSMUST00000172733.1 ENSMUST00000232842.1 | |transcript_name=ENSMUST00000172818.7 ENSMUST00000172733.1 ENSMUST00000232842.1 AK122282 AK168371 AF493070 AK144586 AK164025 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_143247.1 | |tss_id=mm_143247.1 | ||
Latest revision as of 02:19, 27 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -4 |
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| Nearest PromoterID: | NM_144859 |
| Entrez ID: | 224938 |
| Nearest Unigene: | Mm.489681 |
| Nearest Refseq: | NM_144859 |
| Nearest Ensembl: | ENSMUSG00000024083 |
| Gene Name: | praja ring finger ubiquitin ligase 2 |
| Gene Alias: | AI447901|AL022700|Neurodap1|mKIAA0438 |
| Gene Description: | praja ring finger ubiquitin ligase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.