TSS: Mm 149010.1: Difference between revisions

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{{TSSDetail
{{TSSDetail
|U22=
|U22=
|all_trans=ENSMUST00000083153.1:0 NR_004445:0 ENSMUST00000206029.1:-361 ENSMUST00000206786.1:-386
|all_trans=MGI:1933385
|chr=chr19
|chr=chr19
|cpg_percent=0.005
|cpg_percent=0.005
Line 23: Line 23:
|nearest_refseq=NR_004445
|nearest_refseq=NR_004445
|nearest_unigene=Mm.292489
|nearest_unigene=Mm.292489
|num_trans=4
|num_trans=
|species=mouse
|species=mouse
|start=8725860
|start=8725860
|start_of_center_position=8725867
|start_of_center_position=8725867
|strand=+
|strand=+
|transcript_name=ENSMUST00000083153.1 NR_004445
|transcript_name=ENSMUST00000083153.1
|tss_classification=no
|tss_classification=no
|tss_id=mm_149010.1
|tss_id=mm_149010.1

Latest revision as of 04:28, 27 July 2021

Basic information about the TSS


TSS ID:mm_149010.1
Species:mouse
Chr:chr19
Start:8725860
End:8725874
Strand:+
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 5)



Gene and protein annotation


Transcript_name:ENSMUST00000083153.1
Distance:0
GeneID:100127111
HGNC/MGI_ID:MGI:1933385
UniProt_ID:
Gene_name:small nucleolar RNA, C/D box 22
Gene_symbol:Snord22
Gene_synonyms:Rnu22 U22
Gene_source:MGI:1933385



TATA-Box annotation


Distance to TSS:1
Nearest PromoterID:NR_004445
Entrez ID:100127111
Nearest Unigene:Mm.292489
Nearest Refseq:NR_004445
Nearest Ensembl:ENSMUSG00000065087
Gene Name:small nucleolar RNA, C/D box 22
Gene Alias:Rnu22|U22
Gene Description:small nucleolar RNA, C/D box 22
Gene Type:snoRNA
CpG%:0.005
GC%:0.412935
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.