TSS: Mm 161979.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=MGI:1347468 | ||
|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_008023 | |nearest_refseq=NM_008023 | ||
|nearest_unigene=Mm.7971 | |nearest_unigene=Mm.7971 | ||
|num_trans= | |num_trans=14240 | ||
|species=mouse | |species=mouse | ||
|start=16873825 | |start=16873825 | ||
| Line 28: | Line 28: | ||
|strand=- | |strand=- | ||
|tata_box=-18(GCTCAAAAAGCC,+,0.00) | |tata_box=-18(GCTCAAAAAGCC,+,0.00) | ||
|transcript_name= | |transcript_name=X92591 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_161979.1 | |tss_id=mm_161979.1 | ||
Latest revision as of 09:12, 27 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 4 |
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| Nearest PromoterID: | NM_008023 |
| Entrez ID: | 14240 |
| Nearest Unigene: | Mm.7971 |
| Nearest Refseq: | NM_008023 |
| Nearest Ensembl: | ENSMUSG00000056829 |
| Gene Name: | forkhead box B2 |
| Gene Alias: | Fkh4 |
| Gene Description: | forkhead box B2 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -18(GCTCAAAAAGCC,+,0.00) |
TSS expression
Expression data not found.