TSS: Mm 163641.1: Difference between revisions

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{{TSSDetail
{{TSSDetail
|all_trans=BC048555:4 ENSMUST00000222701.1:-7 ENSMUST00000222847.1:-7 ENSMUST00000221961.1:-16 AK006455:35
|all_trans=MGI:1917252
|chr=chr13
|chr=chr13
|cpg_percent=0.03
|cpg_percent=0.03
Line 22: Line 22:
|nearest_refseq=NR_028430
|nearest_refseq=NR_028430
|nearest_unigene=Mm.317358
|nearest_unigene=Mm.317358
|num_trans=5
|num_trans=70002
|species=mouse
|species=mouse
|start=61804272
|start=61804272

Latest revision as of 09:48, 27 July 2021

Basic information about the TSS


TSS ID:mm_163641.1
Species:mouse
Chr:chr13
Start:61804272
End:61804308
Strand:+
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 5)



Gene and protein annotation


Transcript_name:BC048555
Distance:4
GeneID:70002
HGNC/MGI_ID:MGI:1917252
UniProt_ID:
Gene_name:RIKEN cDNA 1700028E11 gene
Gene_symbol:1700028E11Rik
Gene_synonyms:
Gene_source:MGI:1917252



TATA-Box annotation


Distance to TSS:32710
Nearest PromoterID:NR_028430
Entrez ID:432812
Nearest Unigene:Mm.317358
Nearest Refseq:NR_028430
Nearest Ensembl:
Gene Name:RIKEN cDNA 1700028E11 gene
Gene Alias:-
Gene Description:cDNA sequence BC052688
Gene Type:pseudo
CpG%:0.03
GC%:0.532338
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.