TSS: Mm 21798.1: Difference between revisions

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Line 2: Line 2:
|C20orf67=
|C20orf67=
|F730014I05Rik=
|F730014I05Rik=
|all_trans=AK142117:0 AK015392:0 BC037706:4
|all_trans=MGI:1922136
|chr=chr2
|chr=chr2
|cpg_percent=0.15
|cpg_percent=0.15
Line 24: Line 24:
|nearest_refseq=NM_146129
|nearest_refseq=NM_146129
|nearest_unigene=Mm.241134
|nearest_unigene=Mm.241134
|num_trans=3
|num_trans=105244413
|species=mouse
|species=mouse
|start=164879735
|start=164879735

Latest revision as of 14:55, 27 July 2021

Basic information about the TSS


TSS ID:mm_21798.1
Species:mouse
Chr:chr2
Start:164879735
End:164879804
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 5)



Gene and protein annotation


Transcript_name:AK142117 AK015392
Distance:0
GeneID:105244413
HGNC/MGI_ID:MGI:1922136
UniProt_ID:
Gene_name:RIKEN cDNA 4930445K14 gene
Gene_symbol:4930445K14Rik
Gene_synonyms:
Gene_source:MGI:1922136



TATA-Box annotation


Distance to TSS:402
Nearest PromoterID:NM_146129
Entrez ID:228866
Nearest Unigene:Mm.241134
Nearest Refseq:NM_146129
Nearest Ensembl:ENSMUSG00000039849
Gene Name:RIKEN cDNA 4930445K14 gene
Gene Alias:2310022K11Rik|C20orf67|CAPAM|F730014I05Rik
Gene Description:PDX1 C-terminal inhibiting factor 1
Gene Type:protein-coding
CpG%:0.15
GC%:0.79602
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.