TSS: Hg 101039.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.115 |distance_to_tss=168 |entrez_id=55312 |gc_percent=0.731343 |gene_alias=RIFK |gene_description=riboflavin kinase |gene_name=RFK |gene_type=protei...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=BC015473:2 BC007069:-53 ENST00000376736.5:-136 uc004akd.3:-136 AK002011:-136 ENST00000472900.5:-148 ENST00000479197.1:-148 uc064tuj.1:-148 uc064tuk.1:-148 AK315734:-148 AK307079:-148 NM_018339:-159 KJ899117:159 KJ905495:159 ENST00000490113.1:220 uc064tug.1:220 ENST00000483155.5:395 uc064tuh.1:395 | |||
|chr=chr9 | |||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
|distance=2 | |||
|distance_to_tss=168 | |distance_to_tss=168 | ||
|end=76394369 | |||
|entrez_id=55312 | |entrez_id=55312 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_018339 | |nearest_refseq=NM_018339 | ||
|nearest_unigene=Hs.37558 | |nearest_unigene=Hs.37558 | ||
|num_trans=18 | |||
|species=human | |||
|start=76394351 | |||
|strand=- | |||
|transcript_name=BC015473 | |||
|tss_classification=yes | |||
|tss_id=hg_101039.1 | |tss_id=hg_101039.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:26, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 168 |
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| Nearest PromoterID: | NM_018339 |
| Entrez ID: | 55312 |
| Nearest Unigene: | Hs.37558 |
| Nearest Refseq: | NM_018339 |
| Nearest Ensembl: | ENSG00000135002 |
| Gene Name: | RFK |
| Gene Alias: | RIFK |
| Gene Description: | riboflavin kinase |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |