TSS: Mm 54620.1: Difference between revisions

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{{TSSDetail
{{TSSDetail
|all_trans=AK014217:0 LF195415:-217 MA430992:-217
|all_trans=MGI:1920489
|chr=chr6
|chr=chr6
|cpg_percent=0.075
|cpg_percent=0.075
Line 22: Line 22:
|nearest_refseq=NM_025363
|nearest_refseq=NM_025363
|nearest_unigene=Mm.158971
|nearest_unigene=Mm.158971
|num_trans=3
|num_trans=73239
|species=mouse
|species=mouse
|start=38533640
|start=38533640

Latest revision as of 03:00, 28 July 2021

Basic information about the TSS


TSS ID:mm_54620.1
Species:mouse
Chr:chr6
Start:38533640
End:38533669
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 5)



Gene and protein annotation


Transcript_name:AK014217
Distance:0
GeneID:73239
HGNC/MGI_ID:MGI:1920489
UniProt_ID:
Gene_name:RIKEN cDNA 3110054G05 gene
Gene_symbol:3110054G05Rik
Gene_synonyms:
Gene_source:MGI:1920489



TATA-Box annotation


Distance to TSS:-1206
Nearest PromoterID:NM_025363
Entrez ID:66117
Nearest Unigene:Mm.158971
Nearest Refseq:NM_025363
Nearest Ensembl:ENSMUSG00000019689
Gene Name:RIKEN cDNA 3110054G05 gene
Gene Alias:1110001J03Rik
Gene Description:formation of mitochondrial complex V assembly factor 1
Gene Type:protein-coding
CpG%:0.075
GC%:0.567164
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.