TSS: Mm 64566.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=MGI:1096383 | ||
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_008003 | |nearest_refseq=NM_008003 | ||
|nearest_unigene=Mm.3904 | |nearest_unigene=Mm.3904 | ||
|num_trans= | |num_trans=14170 | ||
|species=mouse | |species=mouse | ||
|start=144896523 | |start=144896523 | ||
| Line 28: | Line 28: | ||
|strand=+ | |strand=+ | ||
|tata_box=-33(ACGTATATAAGG,-,0.00) | |tata_box=-33(ACGTATATAAGG,-,0.00) | ||
|transcript_name=ENSMUST00000207040.1 ENSMUST00000033389.6 | |transcript_name=ENSMUST00000207040.1 ENSMUST00000033389.6 AK052093 AK017829 AF007268 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_64566.1 | |tss_id=mm_64566.1 | ||
Latest revision as of 06:42, 28 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -1 |
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| Nearest PromoterID: | NM_008003 |
| Entrez ID: | 14170 |
| Nearest Unigene: | Mm.3904 |
| Nearest Refseq: | NM_008003 |
| Nearest Ensembl: | ENSMUSG00000031073 |
| Gene Name: | fibroblast growth factor 15 |
| Gene Alias: | FGF19 |
| Gene Description: | fibroblast growth factor 15 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -33(ACGTATATAAGG,-,0.00) |
TSS expression
Expression data not found.