TSS: Hg 101093.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=85079 |entrez_id=2776 |gc_percent=0.343284 |gene_alias=CMC1|G-ALPHA-q|GAQ|SWS |gene_description=G protein subunit alpha q |gene_nam...") |
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{{TSSDetail | {{TSSDetail | ||
|G-ALPHA-q= | |||
|GAQ= | |||
|SWS= | |||
|chr=chr9 | |||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance= | |||
|distance_to_tss=85079 | |distance_to_tss=85079 | ||
|end=77946381 | |||
|entrez_id=2776 | |entrez_id=2776 | ||
|gc_percent=0.343284 | |gc_percent=0.343284 | ||
Line 12: | Line 18: | ||
|nearest_refseq=NM_002072 | |nearest_refseq=NM_002072 | ||
|nearest_unigene=Hs.269782 | |nearest_unigene=Hs.269782 | ||
|num_trans=0 | |||
|species=human | |||
|start=77946358 | |||
|strand=- | |||
|tata_box="-41(GTATTTATAGAG,+,0.00)" | |tata_box="-41(GTATTTATAGAG,+,0.00)" | ||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101093.1 | |tss_id=hg_101093.1 | ||
|tss_score=1 | |||
}} | }} |
Revision as of 18:28, 8 March 2018
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 85079 |
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Nearest PromoterID: | NM_002072 |
Entrez ID: | 2776 |
Nearest Unigene: | Hs.269782 |
Nearest Refseq: | NM_002072 |
Nearest Ensembl: | ENSG00000156052 |
Gene Name: | GNAQ |
Gene Alias: | CMC1 |
Gene Description: | G protein subunit alpha q |
Gene Type: | protein-coding |
CpG%: | 0 |
GC%: | 0.343284 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-41(GTATTTATAGAG,+,0.00)" |