TSS: Hg 101103.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=337247 |entrez_id=29968 |gc_percent=0.323383 |gene_alias=EPIP|NLS2|PSA|PSAT|PSATD |gene_description=phosphoserine aminotransfer...") |
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{{TSSDetail | {{TSSDetail | ||
|NLS2= | |||
|PSA= | |||
|PSAT= | |||
|PSATD= | |||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance= | |||
|distance_to_tss=337247 | |distance_to_tss=337247 | ||
|end=78634323 | |||
|entrez_id=29968 | |entrez_id=29968 | ||
|gc_percent=0.323383 | |gc_percent=0.323383 | ||
| Line 12: | Line 19: | ||
|nearest_refseq=NM_021154 | |nearest_refseq=NM_021154 | ||
|nearest_unigene=Hs.494261 | |nearest_unigene=Hs.494261 | ||
|num_trans=0 | |||
|species=human | |||
|start=78634321 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101103.1 | |tss_id=hg_101103.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:29, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 337247 |
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| Nearest PromoterID: | NM_021154 |
| Entrez ID: | 29968 |
| Nearest Unigene: | Hs.494261 |
| Nearest Refseq: | NM_021154 |
| Nearest Ensembl: | ENSG00000135069 |
| Gene Name: | PSAT1 |
| Gene Alias: | EPIP |
| Gene Description: | phosphoserine aminotransferase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.323383 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |