TSS: Hg 101110.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.12 |distance_to_tss=1008 |entrez_id=7091 |gc_percent=0.686567 |gene_alias=BCE-1|BCE1|E(spI)|ESG|ESG4|GRG4|Grg-4 |gene_description=transducin like en...") |
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{{TSSDetail | {{TSSDetail | ||
|BCE1= | |||
|E(spI)= | |||
|ESG= | |||
|ESG4= | |||
|GRG4= | |||
|Grg-4= | |||
|chr=chr9 | |||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
|distance= | |||
|distance_to_tss=1008 | |distance_to_tss=1008 | ||
|end=79572790 | |||
|entrez_id=7091 | |entrez_id=7091 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
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|nearest_refseq=NM_007005 | |nearest_refseq=NM_007005 | ||
|nearest_unigene=Hs.444213 | |nearest_unigene=Hs.444213 | ||
|num_trans=0 | |||
|species=human | |||
|start=79572772 | |||
|strand=- | |||
|tata_box="39(GCTTTAATGACC,+,0.00)" | |tata_box="39(GCTTTAATGACC,+,0.00)" | ||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_101110.1 | |tss_id=hg_101110.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:29, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 1008 |
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| Nearest PromoterID: | NR_104239 |
| Entrez ID: | 7091 |
| Nearest Unigene: | Hs.444213 |
| Nearest Refseq: | NM_007005 |
| Nearest Ensembl: | ENSG00000106829 |
| Gene Name: | TLE4 |
| Gene Alias: | BCE-1 |
| Gene Description: | transducin like enhancer of split 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "39(GCTTTAATGACC,+,0.00)" |