TSS: Hg 101115.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=318261 |entrez_id=7088 |gc_percent=0.527363 |gene_alias=ESG|ESG1|GRG1 |gene_description=transducin like enhancer of split 1 |ge...") |
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{{TSSDetail | {{TSSDetail | ||
|ESG1= | |||
|GRG1= | |||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance= | |||
|distance_to_tss=318261 | |distance_to_tss=318261 | ||
|end=81371276 | |||
|entrez_id=7088 | |entrez_id=7088 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
Line 12: | Line 17: | ||
|nearest_refseq=NM_005077 | |nearest_refseq=NM_005077 | ||
|nearest_unigene=Hs.197320 | |nearest_unigene=Hs.197320 | ||
|num_trans=0 | |||
|species=human | |||
|start=81371272 | |||
|strand=- | |||
|tata_box="-97(GGCCCTATATGG,-,0.00),-95(CCCTATATGGGA,+,0.00)" | |tata_box="-97(GGCCCTATATGG,-,0.00),-95(CCCTATATGGGA,+,0.00)" | ||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101115.1 | |tss_id=hg_101115.1 | ||
|tss_score=1 | |||
}} | }} |
Revision as of 18:29, 8 March 2018
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 318261 |
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Nearest PromoterID: | NM_001303104 |
Entrez ID: | 7088 |
Nearest Unigene: | Hs.197320 |
Nearest Refseq: | NM_005077 |
Nearest Ensembl: | ENSG00000196781 |
Gene Name: | TLE1 |
Gene Alias: | ESG |
Gene Description: | transducin like enhancer of split 1 |
Gene Type: | protein-coding |
CpG%: | 0.005 |
GC%: | 0.527363 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-97(GGCCCTATATGG,-,0.00),-95(CCCTATATGGGA,+,0.00)" |