TSS: Hg 92414.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|NIX= | |NIX= | ||
|all_trans= | |all_trans=HGNC:31403 | ||
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NR_144550 | |nearest_refseq=NR_144550 | ||
|nearest_unigene=Hs.586388 | |nearest_unigene=Hs.586388 | ||
|num_trans= | |num_trans=157489 | ||
|species=human | |species=human | ||
|start=26382967 | |start=26382967 | ||
| Line 29: | Line 29: | ||
|strand=- | |strand=- | ||
|tata_box=-57(CCTTTTCTGCGC,+,0.00) | |tata_box=-57(CCTTTTCTGCGC,+,0.00) | ||
|transcript_name=ENST00000519902.1 | |transcript_name=ENST00000519902.1 BC034827 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_92414.1 | |tss_id=hg_92414.1 | ||
Latest revision as of 15:56, 22 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -36 |
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| Nearest PromoterID: | NR_144550 |
| Entrez ID: | 157489 |
| Nearest Unigene: | Hs.586388 |
| Nearest Refseq: | NR_144550 |
| Nearest Ensembl: | ENSG00000228451 |
| Gene Name: | SDA1 domain containing 1 pseudogene 1 |
| Gene Alias: | - |
| Gene Description: | SDA1 domain containing 1 pseudogene 1 |
| Gene Type: | pseudo |
| CpG%: | 0.12 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -57(CCTTTTCTGCGC,+,0.00) |
TSS expression
Expression data not found.