TSS: Hg 232255.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=X07979:-12 ENST00000414670.2:-35 uc057squ.1:-35 ENST00000302278.7:-48 uc001iwt.5:-48 BC020057:-48 AK291697:-56 ENST00000484088.5:-57 uc057sqi.1:-57 BX53...") |
No edit summary |
||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|FNRB= | |||
|GPIIA= | |||
|MDF2= | |||
|MSK12= | |||
|VLA-BETA= | |||
|VLAB= | |||
|all_trans=X07979:-12 ENST00000414670.2:-35 uc057squ.1:-35 ENST00000302278.7:-48 uc001iwt.5:-48 BC020057:-48 AK291697:-56 ENST00000484088.5:-57 uc057sqi.1:-57 BX537407:-58 ENST00000488494.5:-66 ENST00000417122.6:-66 uc057sql.1:-66 uc057sqq.1:-66 ENST00000474568.5:-71 uc057sqk.1:-71 NM_002211:-204 ENST00000396033.6:264 NM_133376:264 uc001iws.5:264 ENST00000437302.5:364 uc057sqn.1:364 | |all_trans=X07979:-12 ENST00000414670.2:-35 uc057squ.1:-35 ENST00000302278.7:-48 uc001iwt.5:-48 BC020057:-48 AK291697:-56 ENST00000484088.5:-57 uc057sqi.1:-57 BX537407:-58 ENST00000488494.5:-66 ENST00000417122.6:-66 uc057sql.1:-66 uc057sqq.1:-66 ENST00000474568.5:-71 uc057sqk.1:-71 NM_002211:-204 ENST00000396033.6:264 NM_133376:264 uc001iws.5:264 ENST00000437302.5:364 uc057sqn.1:364 | ||
|chr=chr10 | |chr=chr10 | ||
| Line 6: | Line 12: | ||
|distance_to_tss=206 | |distance_to_tss=206 | ||
|end=32958161 | |end=32958161 | ||
|end_of_center_position=34426751 | |||
|entrez_id=3688 | |entrez_id=3688 | ||
|gc_percent=0.810945 | |gc_percent=0.810945 | ||
|gene_alias=CD29 | |gene_alias=CD29 | ||
|gene_description=integrin subunit beta 1 | |gene_description=integrin subunit beta 1 | ||
|gene_name=ITGB1 | |gene_name=ITGB1 | ||
| Line 19: | Line 26: | ||
|species=human | |species=human | ||
|start=32958157 | |start=32958157 | ||
|start_of_center_position=34426750 | |||
|strand=- | |strand=- | ||
|transcript_name=X07979 | |transcript_name=X07979 | ||
Revision as of 02:20, 12 May 2019
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 206 |
|---|---|
| Nearest PromoterID: | NM_002211 |
| Entrez ID: | 3688 |
| Nearest Unigene: | Hs.643813 |
| Nearest Refseq: | NM_002211 |
| Nearest Ensembl: | ENSG00000150093 |
| Gene Name: | ITGB1 |
| Gene Alias: | CD29 |
| Gene Description: | integrin subunit beta 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |