TSS: Hg 101171.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.105 |distance_to_tss=639 |entrez_id=3190 |gc_percent=0.646766 |gene_alias=AUKS|CSBP|HNRPK|TUNP |gene_description=heterogeneous nuclear ribonucleopro...") |
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{{TSSDetail | {{TSSDetail | ||
|CSBP= | |||
|HNRPK= | |||
|TUNP= | |||
|chr=chr9 | |||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
|distance= | |||
|distance_to_tss=639 | |distance_to_tss=639 | ||
|end=83979649 | |||
|entrez_id=3190 | |entrez_id=3190 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_002140 | |nearest_refseq=NM_002140 | ||
|nearest_unigene=Hs.522257 | |nearest_unigene=Hs.522257 | ||
|num_trans=0 | |||
|species=human | |||
|start=83979615 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_101171.1 | |tss_id=hg_101171.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:32, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 639 |
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| Nearest PromoterID: | NM_001318186 |
| Entrez ID: | 3190 |
| Nearest Unigene: | Hs.522257 |
| Nearest Refseq: | NM_002140 |
| Nearest Ensembl: | ENSG00000165119 |
| Gene Name: | HNRNPK |
| Gene Alias: | AUKS |
| Gene Description: | heterogeneous nuclear ribonucleoprotein K |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |