TSS: Hg 1012.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.04 |distance_to_tss=17822 |entrez_id=55160 |gc_percent=0.616915 |gene_alias=GrinchGEF |gene_description=Rho guanine nucleotide exchange factor 10 li...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr1 | |||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance= | |||
|distance_to_tss=17822 | |distance_to_tss=17822 | ||
|end=17636143 | |||
|entrez_id=55160 | |entrez_id=55160 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
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|nearest_refseq=NM_018125 | |nearest_refseq=NM_018125 | ||
|nearest_unigene=Hs.443460 | |nearest_unigene=Hs.443460 | ||
|num_trans=0 | |||
|species=human | |||
|start=17636127 | |||
|strand=+ | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_1012.1 | |tss_id=hg_1012.1 | ||
|tss_score=1 | |||
}} | }} |
Revision as of 18:33, 8 March 2018
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 17822 |
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Nearest PromoterID: | NM_001319838 |
Entrez ID: | 55160 |
Nearest Unigene: | Hs.443460 |
Nearest Refseq: | NM_018125 |
Nearest Ensembl: | ENSG00000074964 |
Gene Name: | ARHGEF10L |
Gene Alias: | GrinchGEF |
Gene Description: | Rho guanine nucleotide exchange factor 10 like |
Gene Type: | protein-coding |
CpG%: | 0.04 |
GC%: | 0.616915 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |