TSS: Hg 101216.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.075 |distance_to_tss=152 |entrez_id=79670 |gc_percent=0.671642 |gene_alias=PAPD6|TUT7 |gene_description=zinc finger CCHC-type containing 6 |gene_nam...") |
No edit summary |
||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|TUT7= | |||
|all_trans=AK308352:-39 BC032456:-91 ENST00000277141.10:-107 uc064ubw.1:-107 AL832193:-107 CR936608:-107 ENST00000375963.7:-109 uc004aoq.4:-109 AK055546:-109 CR933644:-111 ENST00000375960.6:-151 uc004aot.4:-151 AL832026:-151 CR933643:-160 BX641077:-160 BC111003:-171 NM_024617:-184 NM_001185074:-184 NM_001185059:-184 | |||
|chr=chr9 | |||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
|distance=-39 | |||
|distance_to_tss=152 | |distance_to_tss=152 | ||
|end=86354303 | |||
|entrez_id=79670 | |entrez_id=79670 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
|gene_alias=PAPD6|TUT7 | |gene_alias=PAPD6|TUT7 | ||
|gene_description=zinc finger CCHC-type containing 6 | |gene_description=zinc finger CCHC-type containing 6 | ||
|gene_name=ZCCHC6 | |gene_id=79670 | ||
|gene_name=zinc finger CCHC-type containing 6 | |||
|gene_source=HGNC:25817 | |||
|gene_symbol=ZCCHC6 | |||
|gene_synonyms=FLJ13409 KIAA1711 PAPD6 TUT7 | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:25817 | |||
|nearest_ensembl=ENSG00000083223 | |nearest_ensembl=ENSG00000083223 | ||
|nearest_promoter_id=NM_001330718 | |nearest_promoter_id=NM_001330718 | ||
|nearest_refseq=NM_024617 | |nearest_refseq=NM_024617 | ||
|nearest_unigene=Hs.597057 | |nearest_unigene=Hs.597057 | ||
|num_trans=19 | |||
|species=human | |||
|start=86354292 | |||
|strand=- | |||
|transcript_name=AK308352 | |||
|tss_classification=yes | |||
|tss_id=hg_101216.1 | |tss_id=hg_101216.1 | ||
|tss_score=1 | |||
|uniprot_id= | |||
}} | }} | ||
Revision as of 18:33, 8 March 2018
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 152 |
|---|---|
| Nearest PromoterID: | NM_001330718 |
| Entrez ID: | 79670 |
| Nearest Unigene: | Hs.597057 |
| Nearest Refseq: | NM_024617 |
| Nearest Ensembl: | ENSG00000083223 |
| Gene Name: | zinc finger CCHC-type containing 6 |
| Gene Alias: | PAPD6 |
| Gene Description: | zinc finger CCHC-type containing 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.