TSS: Hg 101367.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=44258 |entrez_id=100129347 |gc_percent=0.467662 |gene_alias=C9orf73 |gene_description=long intergenic non-protein coding RNA 484...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000457976.1:229 uc064ufs.1:229 | |||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=229 | |||
|distance_to_tss=44258 | |distance_to_tss=44258 | ||
|end=91163324 | |||
|entrez_id=100129347 | |entrez_id=100129347 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_135306 | |nearest_refseq=NR_135306 | ||
|nearest_unigene=Hs.522287 | |nearest_unigene=Hs.522287 | ||
|num_trans=2 | |||
|species=human | |||
|start=91163315 | |||
|strand=- | |||
|transcript_name=ENST00000457976.1 uc064ufs.1 | |||
|tss_classification=no | |||
|tss_id=hg_101367.1 | |tss_id=hg_101367.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:40, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 44258 |
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| Nearest PromoterID: | NR_135306 |
| Entrez ID: | 100129347 |
| Nearest Unigene: | Hs.522287 |
| Nearest Refseq: | NR_135306 |
| Nearest Ensembl: | ENSG00000229694 |
| Gene Name: | LINC00484 |
| Gene Alias: | C9orf73 |
| Gene Description: | long intergenic non-protein coding RNA 484 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |