TSS: Hg 101403.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=69950 |entrez_id=10558 |gc_percent=0.238806 |gene_alias=HSAN1|HSN1|LBC1|LCB1|SPT1|SPTI |gene_description=serine palmitoyltransferas...") |
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{{TSSDetail | {{TSSDetail | ||
|HSN1= | |||
|LBC1= | |||
|LCB1= | |||
|SPT1= | |||
|SPTI= | |||
|chr=chr9 | |||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance= | |||
|distance_to_tss=69950 | |distance_to_tss=69950 | ||
|end=92045525 | |||
|entrez_id=10558 | |entrez_id=10558 | ||
|gc_percent=0.238806 | |gc_percent=0.238806 | ||
| Line 12: | Line 20: | ||
|nearest_refseq=NM_006415 | |nearest_refseq=NM_006415 | ||
|nearest_unigene=Hs.90458 | |nearest_unigene=Hs.90458 | ||
|num_trans=0 | |||
|species=human | |||
|start=92045522 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101403.1 | |tss_id=hg_101403.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:42, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 69950 |
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| Nearest PromoterID: | NM_178324 |
| Entrez ID: | 10558 |
| Nearest Unigene: | Hs.90458 |
| Nearest Refseq: | NM_006415 |
| Nearest Ensembl: | ENSG00000090054 |
| Gene Name: | SPTLC1 |
| Gene Alias: | HSAN1 |
| Gene Description: | serine palmitoyltransferase long chain base subunit 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.238806 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |