TSS: Hg 101446.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=-3090 |entrez_id=1842 |gc_percent=0.447761 |gene_alias=- |gene_description=extracellular matrix protein 2 |gene_name=ECM2 |gene_...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000447622.1:-1 | |||
|chr=chr9 | |||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=-1 | |||
|distance_to_tss=-3090 | |distance_to_tss=-3090 | ||
|end=92539183 | |||
|entrez_id=1842 | |entrez_id=1842 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
Line 12: | Line 16: | ||
|nearest_refseq=NM_001393 | |nearest_refseq=NM_001393 | ||
|nearest_unigene=Hs.117060 | |nearest_unigene=Hs.117060 | ||
|num_trans=1 | |||
|species=human | |||
|start=92539180 | |||
|strand=- | |||
|transcript_name=ENST00000447622.1 | |||
|tss_classification=no | |||
|tss_id=hg_101446.1 | |tss_id=hg_101446.1 | ||
|tss_score=1 | |||
}} | }} |
Revision as of 18:43, 8 March 2018
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | -3090 |
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Nearest PromoterID: | NM_001393 |
Entrez ID: | 1842 |
Nearest Unigene: | Hs.117060 |
Nearest Refseq: | NM_001393 |
Nearest Ensembl: | ENSG00000106823 |
Gene Name: | ECM2 |
Gene Alias: | - |
Gene Description: | extracellular matrix protein 2 |
Gene Type: | protein-coding |
CpG%: | 0.03 |
GC%: | 0.447761 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |