TSS: Hg 101456.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.05 |distance_to_tss=-3 |entrez_id=83744 |gc_percent=0.557214 |gene_alias=BA526D8.4 |gene_description=zinc finger protein 484 |gene_name=ZNF484 |gene...") |
No edit summary |
||
Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000395505.6:0 ENST00000395506.7:0 ENST00000332591.6:0 NM_001261460:0 NM_001261459:0 NM_001261458:0 NM_031486:0 NM_001007101:0 uc011lub.2:0 uc031tel.1:0 uc004asv.3:0 AK309617:0 AK292997:0 ENST00000375495.7:11 uc004asu.3:11 AL833202:11 AK091203:31 AK299274:83 | |||
|chr=chr9 | |||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
|distance=0 | |||
|distance_to_tss=-3 | |distance_to_tss=-3 | ||
|end=92878063 | |||
|entrez_id=83744 | |entrez_id=83744 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
|gene_alias=BA526D8.4 | |gene_alias=BA526D8.4 | ||
|gene_description=zinc finger protein 484 | |gene_description=zinc finger protein 484 | ||
|gene_name=ZNF484 | |gene_id=83744 | ||
|gene_name=zinc finger protein 484 | |||
|gene_source=HGNC:23385 | |||
|gene_symbol=ZNF484 | |||
|gene_synonyms=BA526D8.4 FLJ33884 | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:23385 | |||
|nearest_ensembl=ENSG00000127081 | |nearest_ensembl=ENSG00000127081 | ||
|nearest_promoter_id=NM_001261459 | |nearest_promoter_id=NM_001261459 | ||
|nearest_refseq=NM_031486 | |nearest_refseq=NM_031486 | ||
|nearest_unigene=Hs.668378 | |nearest_unigene=Hs.668378 | ||
|num_trans=18 | |||
|species=human | |||
|start=92878018 | |||
|strand=- | |||
|transcript_name=ENST00000395505.6 ENST00000395506.7 ENST00000332591.6 NM_001261460 NM_001261459 NM_001261458 NM_031486 NM_001007101 uc011lub.2 uc031tel.1 uc004asv.3 AK309617 AK292997 | |||
|tss_classification=no | |||
|tss_id=hg_101456.1 | |tss_id=hg_101456.1 | ||
|tss_score=1 | |||
|uniprot_id=A8KAD2 Q5JVG2 | |||
}} | }} |
Revision as of 18:44, 8 March 2018
Basic information about the TSS
|
| |||||||||||||
TSS cluster detected* |
---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | -3 |
---|---|
Nearest PromoterID: | NM_001261459 |
Entrez ID: | 83744 |
Nearest Unigene: | Hs.668378 |
Nearest Refseq: | NM_031486 |
Nearest Ensembl: | ENSG00000127081 |
Gene Name: | zinc finger protein 484 |
Gene Alias: | BA526D8.4 |
Gene Description: | zinc finger protein 484 |
Gene Type: | protein-coding |
CpG%: | 0.05 |
GC%: | 0.557214 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.