TSS: Hg 117010.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.035 |distance_to_tss=-41 |entrez_id=143941 |gc_percent=0.472637 |gene_alias=HBP21 |gene_description=tetratricopeptide repeat domain 36 |gene_name=TT...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr11 | |||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance= | |||
|distance_to_tss=-41 | |distance_to_tss=-41 | ||
|end=118530422 | |||
|entrez_id=143941 | |entrez_id=143941 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| Line 12: | Line 15: | ||
|nearest_refseq=NM_001080441 | |nearest_refseq=NM_001080441 | ||
|nearest_unigene=Hs.653449 | |nearest_unigene=Hs.653449 | ||
|num_trans=0 | |||
|species=human | |||
|start=118530411 | |||
|strand=+ | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_117010.1 | |tss_id=hg_117010.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 05:50, 9 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -41 |
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| Nearest PromoterID: | NM_001346098 |
| Entrez ID: | 143941 |
| Nearest Unigene: | Hs.653449 |
| Nearest Refseq: | NM_001080441 |
| Nearest Ensembl: | ENSG00000172425 |
| Gene Name: | TTC36 |
| Gene Alias: | HBP21 |
| Gene Description: | tetratricopeptide repeat domain 36 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |