TSS: Hg 101608.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.16 |distance_to_tss=-35 |entrez_id=195827 |gc_percent=0.80597 |gene_alias=C9orf21 |gene_description=AhpC/TSA antioxidant enzyme domain containing 1...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=NM_153698:32 BC136501:32 BC136503:32 ENST00000446045.1:46 uc064uox.1:46 ENST00000375234.7:68 uc004awm.4:68 ENST00000464512.1:377 uc064uoy.1:377 | |||
|chr=chr9 | |||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
|distance=32 | |||
|distance_to_tss=-35 | |distance_to_tss=-35 | ||
|end=96655355 | |||
|entrez_id=195827 | |entrez_id=195827 | ||
|gc_percent=0.80597 | |gc_percent=0.80597 | ||
|gene_alias=C9orf21 | |gene_alias=C9orf21 | ||
|gene_description=AhpC/TSA antioxidant enzyme domain containing 1 | |gene_description=AhpC/TSA antioxidant enzyme domain containing 1 | ||
|gene_name=AAED1 | |gene_id=195827 | ||
|gene_name=AhpC/TSA antioxidant enzyme domain containing 1 | |||
|gene_source=HGNC:16881 | |||
|gene_symbol=AAED1 | |||
|gene_synonyms= | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:16881 | |||
|nearest_ensembl=ENSG00000158122 | |nearest_ensembl=ENSG00000158122 | ||
|nearest_promoter_id=NM_153698 | |nearest_promoter_id=NM_153698 | ||
|nearest_refseq=NM_153698 | |nearest_refseq=NM_153698 | ||
|nearest_unigene=Hs.44640 | |nearest_unigene=Hs.44640 | ||
|num_trans=9 | |||
|species=human | |||
|start=96655348 | |||
|strand=- | |||
|transcript_name=NM_153698 BC136501 BC136503 | |||
|tss_classification=yes | |||
|tss_id=hg_101608.1 | |tss_id=hg_101608.1 | ||
|tss_score=1 | |||
|uniprot_id=B7ZKK1 Q7RTV5 | |||
}} | }} | ||
Revision as of 18:50, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -35 |
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| Nearest PromoterID: | NM_153698 |
| Entrez ID: | 195827 |
| Nearest Unigene: | Hs.44640 |
| Nearest Refseq: | NM_153698 |
| Nearest Ensembl: | ENSG00000158122 |
| Gene Name: | AhpC/TSA antioxidant enzyme domain containing 1 |
| Gene Alias: | C9orf21 |
| Gene Description: | AhpC/TSA antioxidant enzyme domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.80597 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.