TSS: Hg 101613.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=-18541 |entrez_id=441454 |gc_percent=0.462687 |gene_alias=- |gene_description="prothymosin, alpha pseudogene" |gene_name=LOC4414...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance= | |||
|distance_to_tss=-18541 | |distance_to_tss=-18541 | ||
|end=96890541 | |||
|entrez_id=441454 | |entrez_id=441454 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| Line 12: | Line 15: | ||
|nearest_refseq=NR_028350 | |nearest_refseq=NR_028350 | ||
|nearest_unigene=Hs.653264 | |nearest_unigene=Hs.653264 | ||
|num_trans=0 | |||
|species=human | |||
|start=96890527 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101613.1 | |tss_id=hg_101613.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:51, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -18541 |
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| Nearest PromoterID: | NR_028350 |
| Entrez ID: | 441454 |
| Nearest Unigene: | Hs.653264 |
| Nearest Refseq: | NR_028350 |
| Nearest Ensembl: | |
| Gene Name: | LOC441454 |
| Gene Alias: | - |
| Gene Description: | "prothymosin, alpha pseudogene" |
| Gene Type: | pseudo |
| CpG%: | 0.02 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |