TSS: Hg 101655.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.17 |distance_to_tss=1575 |entrez_id=10541 |gc_percent=0.791045 |gene_alias=APRIL|PHAPI2|SSP29 |gene_description=acidic nuclear phosphoprotein 32 fam...") |
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{{TSSDetail | {{TSSDetail | ||
|PHAPI2= | |||
|SSP29= | |||
|chr=chr9 | |||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
|distance= | |||
|distance_to_tss=1575 | |distance_to_tss=1575 | ||
|end=97984795 | |||
|entrez_id=10541 | |entrez_id=10541 | ||
|gc_percent=0.791045 | |gc_percent=0.791045 | ||
Line 12: | Line 17: | ||
|nearest_refseq=NM_006401 | |nearest_refseq=NM_006401 | ||
|nearest_unigene=Hs.730654 | |nearest_unigene=Hs.730654 | ||
|num_trans=0 | |||
|species=human | |||
|start=97984769 | |||
|strand=- | |||
|tata_box="-31(GCCCTTTTAAGA,-,0.00),-29(CCTTTTAAGAAG,+,0.00)" | |tata_box="-31(GCCCTTTTAAGA,-,0.00),-29(CCTTTTAAGAAG,+,0.00)" | ||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_101655.1 | |tss_id=hg_101655.1 | ||
|tss_score=1 | |||
}} | }} |
Revision as of 18:52, 8 March 2018
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 1575 |
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Nearest PromoterID: | NM_006401 |
Entrez ID: | 10541 |
Nearest Unigene: | Hs.730654 |
Nearest Refseq: | NM_006401 |
Nearest Ensembl: | ENSG00000136938 |
Gene Name: | ANP32B |
Gene Alias: | APRIL |
Gene Description: | acidic nuclear phosphoprotein 32 family member B |
Gene Type: | protein-coding |
CpG%: | 0.17 |
GC%: | 0.791045 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-31(GCCCTTTTAAGA,-,0.00),-29(CCTTTTAAGAAG,+,0.00)" |