TSS: Hg 101764.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.08 |distance_to_tss=-161 |entrez_id=56254 |gc_percent=0.60199 |gene_alias=BRE1|BRE1A|hBRE1 |gene_description=ring finger protein 20 |gene_name=RNF20...") |
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{{TSSDetail | {{TSSDetail | ||
|BRE1A= | |||
|all_trans=ENST00000482920.1:146 uc064uvr.1:146 ENST00000374851.1:235 uc064uvq.1:235 BC033550:235 | |||
|chr=chr9 | |||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
|distance=146 | |||
|distance_to_tss=-161 | |distance_to_tss=-161 | ||
|end=101533693 | |||
|entrez_id=56254 | |entrez_id=56254 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
|gene_alias=BRE1|BRE1A|hBRE1 | |gene_alias=BRE1|BRE1A|hBRE1 | ||
|gene_description=ring finger protein 20 | |gene_description=ring finger protein 20 | ||
|gene_name= | |gene_id=84302 | ||
|gene_name=transmembrane protein 246 | |||
|gene_source=HGNC:28180 | |||
|gene_symbol=TMEM246 | |||
|gene_synonyms=MGC12992 | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hBRE1= | |||
|hgnc_mgi_id=HGNC:28180 | |||
|nearest_ensembl=ENSG00000155827 | |nearest_ensembl=ENSG00000155827 | ||
|nearest_promoter_id=NM_019592 | |nearest_promoter_id=NM_019592 | ||
|nearest_refseq=NM_019592 | |nearest_refseq=NM_019592 | ||
|nearest_unigene=Hs.729085 | |nearest_unigene=Hs.729085 | ||
|num_trans=5 | |||
|species=human | |||
|start=101533682 | |||
|strand=- | |||
|transcript_name=ENST00000482920.1 uc064uvr.1 | |||
|tss_classification=yes | |||
|tss_id=hg_101764.1 | |tss_id=hg_101764.1 | ||
|tss_score=1 | |||
|uniprot_id= | |||
}} | }} | ||
Revision as of 18:57, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -161 |
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| Nearest PromoterID: | NM_019592 |
| Entrez ID: | 56254 |
| Nearest Unigene: | Hs.729085 |
| Nearest Refseq: | NM_019592 |
| Nearest Ensembl: | ENSG00000155827 |
| Gene Name: | transmembrane protein 246 |
| Gene Alias: | BRE1 |
| Gene Description: | ring finger protein 20 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.