TSS: Hg 101839.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=2170 |entrez_id=9314 |gc_percent=0.711443 |gene_alias=EZF|GKLF |gene_description=Kruppel like factor 4 |gene_name=KLF4 |gene_ty...") |
No edit summary |
||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|GKLF= | |||
|all_trans=AK026253:4 | |||
|chr=chr9 | |||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance=4 | |||
|distance_to_tss=2170 | |distance_to_tss=2170 | ||
|end=107487556 | |||
|entrez_id=9314 | |entrez_id=9314 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_004235 | |nearest_refseq=NM_004235 | ||
|nearest_unigene=Hs.376206 | |nearest_unigene=Hs.376206 | ||
|num_trans=1 | |||
|species=human | |||
|start=107487543 | |||
|strand=- | |||
|transcript_name=AK026253 | |||
|tss_classification=yes | |||
|tss_id=hg_101839.1 | |tss_id=hg_101839.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:00, 8 March 2018
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 2170 |
|---|---|
| Nearest PromoterID: | NM_001314052 |
| Entrez ID: | 9314 |
| Nearest Unigene: | Hs.376206 |
| Nearest Refseq: | NM_004235 |
| Nearest Ensembl: | ENSG00000136826 |
| Gene Name: | KLF4 |
| Gene Alias: | EZF |
| Gene Description: | Kruppel like factor 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |