TSS: Hg 101848.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.1 |distance_to_tss=-148004 |entrez_id=9314 |gc_percent=0.681592 |gene_alias=EZF|GKLF |gene_description=Kruppel like factor 4 |gene_name=KLF4 |gene_t...") |
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{{TSSDetail | {{TSSDetail | ||
|GKLF= | |||
|chr=chr9 | |||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance= | |||
|distance_to_tss=-148004 | |distance_to_tss=-148004 | ||
|end=107637726 | |||
|entrez_id=9314 | |entrez_id=9314 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
Line 12: | Line 16: | ||
|nearest_refseq=NM_004235 | |nearest_refseq=NM_004235 | ||
|nearest_unigene=Hs.376206 | |nearest_unigene=Hs.376206 | ||
|num_trans=0 | |||
|species=human | |||
|start=107637722 | |||
|strand=- | |||
|tata_box="-35(GCATATTTAAGG,-,0.00)" | |tata_box="-35(GCATATTTAAGG,-,0.00)" | ||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_101848.1 | |tss_id=hg_101848.1 | ||
|tss_score=1 | |||
}} | }} |
Revision as of 19:01, 8 March 2018
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | -148004 |
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Nearest PromoterID: | NM_004235 |
Entrez ID: | 9314 |
Nearest Unigene: | Hs.376206 |
Nearest Refseq: | NM_004235 |
Nearest Ensembl: | ENSG00000136826 |
Gene Name: | KLF4 |
Gene Alias: | EZF |
Gene Description: | Kruppel like factor 4 |
Gene Type: | protein-coding |
CpG%: | 0.1 |
GC%: | 0.681592 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-35(GCATATTTAAGG,-,0.00)" |