TSS: Rfhg 100339.1: Difference between revisions

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|gene_type=ncRNA
|gene_type=ncRNA
|hgnc_mgi_id=
|hgnc_mgi_id=
|methods=C1CAGE
|nearest_ensembl=ENSG00000284135
|nearest_ensembl=ENSG00000284135
|nearest_promoter_id=NR_037427
|nearest_promoter_id=NR_037427
Line 27: Line 28:
|peak_score=1
|peak_score=1
|reftss_version=4
|reftss_version=4
|source_datasets=PRJDB5282
|species=human
|species=human
|start=132968606
|start=132968606

Revision as of 14:45, 6 December 2023

Basic information about the TSS

TSS ID:rfhg_100339.1
Species:human
Chr:chr7
Start:132968606
End:132968606
Strand:-
Source datasetsPRJDB5282
ProtocolC1CAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation

Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:MIR3654
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation

    Distance to TSS:66309
    Nearest PromoterID:NR_037427
    Entrez ID:100500804
    Nearest Unigene:
    Nearest Refseq:NR_037427
    Nearest Ensembl:ENSG00000284135
    Gene Name:MIR3654
    Gene Alias:-
    Gene Type:ncRNA
    CpG%:0.000000
    GC%:0.000000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



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