TSS: Hg 101884.1: Difference between revisions

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(Created page with "{{TSSDetail |cpg_percent=0.045 |distance_to_tss=65371 |entrez_id=54566 |gc_percent=0.522388 |gene_alias=CG1|EHM2 |gene_description=erythrocyte membrane protein band 4.1 like 4...")
 
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{{TSSDetail
{{TSSDetail
|EHM2=
|chr=chr9
|cpg_percent=0.045
|cpg_percent=0.045
|distance=
|distance_to_tss=65371
|distance_to_tss=65371
|end=109255599
|entrez_id=54566
|entrez_id=54566
|gc_percent=0.522388
|gc_percent=0.522388
Line 12: Line 16:
|nearest_refseq=NM_018424
|nearest_refseq=NM_018424
|nearest_unigene=Hs.591901
|nearest_unigene=Hs.591901
|num_trans=0
|species=human
|start=109255587
|strand=-
|tata_box="-98(TCCTCTTTAAGG,-,0.00),-95(TCTTTAAGGGAC,+,0.00)"
|tata_box="-98(TCCTCTTTAAGG,-,0.00),-95(TCTTTAAGGGAC,+,0.00)"
|transcript_name=
|tss_classification=no
|tss_id=hg_101884.1
|tss_id=hg_101884.1
|tss_score=1
}}
}}

Revision as of 19:02, 8 March 2018

Basic information about the TSS


TSS ID:hg_101884.1
Species:human
Chr:chr9
Start:109255587
End:109255599
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation


Transcript_name:
Distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Gene_name:EPB41L4B
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:65371
Nearest PromoterID:NM_018424
Entrez ID:54566
Nearest Unigene:Hs.591901
Nearest Refseq:NM_018424
Nearest Ensembl:ENSG00000095203
Gene Name:EPB41L4B
Gene Alias:CG1
Gene Description:erythrocyte membrane protein band 4.1 like 4B
Gene Type:protein-coding
CpG%:0.045
GC%:0.522388
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"-98(TCCTCTTTAAGG,-,0.00),-95(TCTTTAAGGGAC,+,0.00)"