TSS: Rfhg 113986.1: Difference between revisions

Latest revision as of 18:54, 6 December 2023

Basic information about the TSS

TSS ID:	rfhg_113986.1
Species:	human
Chr:	chr9

Start:	21482289
End:	21482289
Strand:	-

Source datasets

EPD

Protocol

TSS_database

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Transcript_name:	ENST00000448696.4 AY358570
Distance:	-24
GeneID:	338376
HGNC/MGI_ID:	HGNC:18163
UniProt_ID:	Q86WN2

Gene_name:	IFNE
Gene_symbol:	IFNE
Gene_synonyms:	IFNE1
Gene_source:	HGNC:18163

TATA-Box annotation

Distance to TSS:	24
Nearest PromoterID:	NM_176891
Entrez ID:	338376
Nearest Unigene:	Hs.682604
Nearest Refseq:	NM_176891
Nearest Ensembl:	ENSG00000184995
Gene Name:	IFNE
Gene Alias:	IFN-E\|IFNE1\|IFNT1\|INFE1\|PRO655
Gene Description:	interferon epsilon
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 21: / Line 21: @@
 |gene_type=protein-coding
 |hgnc_mgi_id=HGNC:18163
+|methods=TSS_database
 |nearest_ensembl=ENSG00000184995
 |nearest_promoter_id=NM_176891
@@ Line 27: / Line 28: @@
 |peak_score=1
 |reftss_version=4
+|source_datasets=EPD
 |species=human
 |start=21482289