TSS: Hg 101910.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=-8024 |entrez_id=114299 |gc_percent=0.567164 |gene_alias=AKAP2 |gene_description=paralemmin 2 |gene_name=PALM2 |gene_type=protei...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000449258.1:227 uc064uzr.1:227 | |||
|chr=chr9 | |||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=227 | |||
|distance_to_tss=-8024 | |distance_to_tss=-8024 | ||
|end=109772276 | |||
|entrez_id=114299 | |entrez_id=114299 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_053016 | |nearest_refseq=NM_053016 | ||
|nearest_unigene=Hs.591908 | |nearest_unigene=Hs.591908 | ||
|num_trans=2 | |||
|species=human | |||
|start=109772269 | |||
|strand=- | |||
|transcript_name=ENST00000449258.1 uc064uzr.1 | |||
|tss_classification=no | |||
|tss_id=hg_101910.1 | |tss_id=hg_101910.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:03, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -8024 |
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| Nearest PromoterID: | NM_053016 |
| Entrez ID: | 114299 |
| Nearest Unigene: | Hs.591908 |
| Nearest Refseq: | NM_053016 |
| Nearest Ensembl: | ENSG00000157654 |
| Gene Name: | PALM2 |
| Gene Alias: | AKAP2 |
| Gene Description: | paralemmin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |