TSS: Hg 101955.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=32539 |entrez_id=1902 |gc_percent=0.442786 |gene_alias=EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1 |gene_descriptio...") |
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{{TSSDetail | {{TSSDetail | ||
|GPR26= | |||
|Gpcr26= | |||
|LPA1= | |||
|Mrec1.3= | |||
|VZG1= | |||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance= | |||
|distance_to_tss=32539 | |distance_to_tss=32539 | ||
|edg-2= | |||
|end=111005547 | |||
|entrez_id=1902 | |entrez_id=1902 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
| Line 12: | Line 21: | ||
|nearest_refseq=NM_001401 | |nearest_refseq=NM_001401 | ||
|nearest_unigene=Hs.126667 | |nearest_unigene=Hs.126667 | ||
|num_trans=0 | |||
|rec.1.3= | |||
|species=human | |||
|start=111005544 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101955.1 | |tss_id=hg_101955.1 | ||
|tss_score=1 | |||
|vzg-1= | |||
}} | }} | ||
Revision as of 19:05, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 32539 |
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| Nearest PromoterID: | NM_001401 |
| Entrez ID: | 1902 |
| Nearest Unigene: | Hs.126667 |
| Nearest Refseq: | NM_001401 |
| Nearest Ensembl: | ENSG00000198121 |
| Gene Name: | LPAR1 |
| Gene Alias: | EDG2 |
| Gene Description: | lysophosphatidic acid receptor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |