TSS: Hg 100169.1: Difference between revisions

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|distance_to_tss=103243
|distance_to_tss=103243
|end=19512176
|end=19512176
|end_of_center_position=19512171
|entrez_id=340485
|entrez_id=340485
|gc_percent=0.497512
|gc_percent=0.497512
|gene_alias=ALKCDase2|ASAH3L
|gene_alias=ALKCDase2
|gene_description=alkaline ceramidase 2
|gene_description=alkaline ceramidase 2
|gene_name=ACER2
|gene_name=ACER2
Line 19: Line 20:
|species=human
|species=human
|start=19512164
|start=19512164
|start_of_center_position=19512170
|strand=-
|strand=-
|tata_box="31(AGCTTTTAAAGG,-,0.00),32(GCTTTTAAAGGC,+,0.00),32(GCTTTTAAAGGC,-,0.00),33(CTTTTAAAGGCC,+,0.00)"
|tata_box="31(AGCTTTTAAAGG,-,0.00),32(GCTTTTAAAGGC,+,0.00),32(GCTTTTAAAGGC,-,0.00),33(CTTTTAAAGGCC,+,0.00)"

Revision as of 05:23, 11 May 2019

Basic information about the TSS

TSS ID:hg_100169.1
Species:human
Chr:chr9
Start:19512164
End:19512176
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation

Transcript_name:
Distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Gene_name:ACER2
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation

Distance to TSS:103243
Nearest PromoterID:NM_001010887
Entrez ID:340485
Nearest Unigene:Hs.41379
Nearest Refseq:NM_001010887
Nearest Ensembl:ENSG00000177076
Gene Name:ACER2
Gene Alias:ALKCDase2
Gene Description:alkaline ceramidase 2
Gene Type:protein-coding
CpG%:0.01
GC%:0.497512
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"31(AGCTTTTAAAGG,-,0.00),32(GCTTTTAAAGGC,+,0.00),32(GCTTTTAAAGGC,-,0.00),33(CTTTTAAAGGCC,+,0.00)"



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