TSS: Rfhg 37381.1: Difference between revisions

Revision as of 13:46, 8 December 2023

Basic information about the TSS

TSS ID:	rfhg_37381.1
Species:	human
Chr:	chr2

Start:	201132800
End:	201132811
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D3231358,EH38E2065862)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	NM_001202518.2:-19
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	CFLAR
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	24
Nearest PromoterID:	NM_001202518
Entrez ID:	8837
Nearest Unigene:	Hs.390736
Nearest Refseq:	NM_003879
Nearest Ensembl:	ENSG00000003402
Gene Name:	CFLAR
Gene Alias:	CASH\|CASP8AP1\|CLARP\|Casper\|FLAME\|FLAME-1\|FLAME1\|FLIP\|I-FLICE\|MRIT\|c-FLIP\|c-FLIPL\|c-FLIPR\|c-FLIPS\|cFLIP
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.416667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 21: / Line 21: @@
 |gene_type=protein-coding
 |hgnc_mgi_id=
+|methods=CAGE
 |nearest_ensembl=ENSG00000003402
 |nearest_promoter_id=NM_001202518
@@ Line 27: / Line 28: @@
 |peak_score=1
 |reftss_version=4
+|source_datasets=FANTOM5
 |species=human
 |start=201132800