TSS: Rfhg 79940.1: Difference between revisions

Revision as of 02:54, 9 December 2023

Basic information about the TSS

TSS ID:	rfhg_79940.1
Species:	human
Chr:	chr6

Start:	29458525
End:	29458525
Strand:	+

Source datasets

EPD

Protocol

TSS_database

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	AJ459836:-71
GeneID:	26716
HGNC/MGI_ID:	HGNC:8252
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	OR2H1
Gene_symbol:	OR2H1
Gene_synonyms:	OR6-2
Gene_source:	HGNC:8252

TATA-Box annotation

Distance to TSS:	1370
Nearest PromoterID:	NM_001318022
Entrez ID:	26716
Nearest Unigene:	Hs.434715
Nearest Refseq:	NM_030883
Nearest Ensembl:	ENSG00000204688
Gene Name:	OR2H1
Gene Alias:	6M1-16\|HS6M1-16\|OLFR42A-9004-14\|OLFR42A-9004.14/9026.2\|OR2H6\|OR2H8\|OR6-2\|dJ994E9.4
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 21: / Line 21: @@
 |gene_type=protein-coding
 |hgnc_mgi_id=HGNC:8252
+|methods=TSS_database
 |nearest_ensembl=ENSG00000204688
 |nearest_promoter_id=NM_001318022
@@ Line 27: / Line 28: @@
 |peak_score=1
 |reftss_version=4
+|source_datasets=EPD
 |species=human
 |start=29458525