TSS: Rfhg 84722.1: Difference between revisions

Revision as of 04:25, 9 December 2023

Basic information about the TSS

TSS ID:	rfhg_84722.1
Species:	human
Chr:	chr6

Start:	77653035
End:	77653043
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000684080.1:0
GeneID:	101928601
HGNC/MGI_ID:	HGNC:43638
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	MEI4
Gene_symbol:	MEI4
Gene_synonyms:
Gene_source:	HGNC:43638

TATA-Box annotation

Distance to TSS:	0
Nearest PromoterID:	NM_001322247
Entrez ID:	101928601
Nearest Unigene:	Hs.544538
Nearest Refseq:	NM_001282136
Nearest Ensembl:	ENSG00000269964
Gene Name:	MEI4
Gene Alias:	-
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.555556
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 21: / Line 21: @@
 |gene_type=protein-coding
 |hgnc_mgi_id=HGNC:43638
+|methods=CAGE
 |nearest_ensembl=ENSG00000269964
 |nearest_promoter_id=NM_001322247
@@ Line 27: / Line 28: @@
 |peak_score=1
 |reftss_version=4
+|source_datasets=FANTOM5
 |species=human
 |start=77653035