TSS: Hg 100838.1: Difference between revisions

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Line 6: Line 6:
|distance_to_tss=334
|distance_to_tss=334
|end=70259303
|end=70259303
|end_of_center_position=70259297
|entrez_id=23137
|entrez_id=23137
|gc_percent=0.681592
|gc_percent=0.681592
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|species=human
|species=human
|start=70259289
|start=70259289
|start_of_center_position=70259296
|strand=-
|strand=-
|transcript_name=NR_039990 BC040840
|transcript_name=NR_039990 BC040840

Revision as of 07:30, 11 May 2019

Basic information about the TSS


TSS ID:hg_100838.1
Species:human
Chr:chr9
Start:70259289
End:70259303
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation


Transcript_name:NR_039990 BC040840
Distance:416
GeneID:100507299
HGNC/MGI_ID:HGNC:48718
UniProt_ID:
Gene_name:SMC5 antisense RNA 1 (head to head)
Gene_symbol:SMC5-AS1
Gene_synonyms:MAMDC2-AS2
Gene_source:HGNC:48718



TATA-Box annotation


Distance to TSS:334
Nearest PromoterID:NM_015110
Entrez ID:23137
Nearest Unigene:Hs.534189
Nearest Refseq:NM_015110
Nearest Ensembl:ENSG00000198887
Gene Name:SMC5 antisense RNA 1 (head to head)
Gene Alias:SMC5L1
Gene Description:structural maintenance of chromosomes 5
Gene Type:protein-coding
CpG%:0.105
GC%:0.681592
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.