TSS: Mm 109016.1: Difference between revisions

Revision as of 19:20, 12 May 2019

Basic information about the TSS

TSS cluster detected^*

* The number of TSS cluster called studies (maximum 5)

Gene and protein annotation

Gene_name:	"interferon, alpha-inducible protein 27"
Gene_symbol:	Ifi27
Gene_synonyms:	1110013J02Rik 2900026P10Rik D12Ertd647e Ifi27l1
Gene_source:	MGI:1277180

TATA-Box annotation

Distance to TSS:	59
Nearest PromoterID:	NM_194069
Entrez ID:	52668
Nearest Unigene:	Mm.2121
Nearest Refseq:	NM_026790
Nearest Ensembl:	ENSMUSG00000064215
Gene Name:	"interferon, alpha-inducible protein 27"
Gene Alias:	1110013J02Rik
Gene Description:	"interferon, alpha-inducible protein 27"
Gene Type:	protein-coding
CpG%:	0.02
GC%:	0.477612
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetail
+|2900026P10Rik=
+|D12Ertd647e=
+|ISG12a=
+|Ifi27l1=
 |all_trans=ENSMUST00000122905.7:0 ENSMUST00000085065.11:0 AK003665:0 AK075797:0 BC125301:0 BC125636:0 AK169926:0 ENSMUST00000066701.12:-3 AK146231:-3 ENSMUST00000079294.11:-4 ENSMUST00000076788.11:-4 ENSMUST00000076702.11:-4 ENSMUST00000148824.1:4 AJ566111:-4 AJ566112:-4 AJ566113:-4 AJ566114:-4 AJ566115:-4 BC128276:9 ENSMUST00000140838.1:11 AK187394:11 NM_026790:-26 NM_194069:-26 NM_194068:-26 NM_194067:-26 NM_194066:-26 uc007ovo.2:-26 uc007ovp.2:-26 uc007ovq.2:-26 uc007ovr.2:-26 uc007ovs.2:-26 uc007ovt.2:-26
 |chr=chr12
@@ Line 6: / Line 10: @@
 |distance_to_tss=59
 |end=103434281
+|end_of_center_position=103434248
 |entrez_id=52668
 |gc_percent=0.477612
-|gene_alias=1110013J02Rik|2900026P10Rik|D12Ertd647e|ISG12a|Ifi27l1
+|gene_alias=1110013J02Rik
 |gene_description="interferon, alpha-inducible protein 27"
 |gene_id=52668
@@ Line 24: / Line 29: @@
 |species=mouse
 |start=103434214
+|start_of_center_position=103434247
 |strand=+
 |transcript_name=ENSMUST00000122905.7 ENSMUST00000085065.11 AK003665 AK075797 BC125301 BC125636 AK169926