TSS: Hg 101268.1: Difference between revisions

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|distance_to_tss=-33328
|distance_to_tss=-33328
|end=88685490
|end=88685490
|end_of_center_position=88685489
|entrez_id=286238
|entrez_id=286238
|gc_percent=0.467662
|gc_percent=0.467662
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|species=human
|species=human
|start=88685486
|start=88685486
|start_of_center_position=88685488
|strand=-
|strand=-
|tata_box="-80(CTCTATAAAATG,-,0.00),-44(GGCCATATAAGG,-,0.00),-42(CCATATAAGGGA,+,0.00)"
|tata_box="-80(CTCTATAAAATG,-,0.00),-44(GGCCATATAAGG,-,0.00),-42(CCATATAAGGGA,+,0.00)"

Revision as of 08:55, 11 May 2019

Basic information about the TSS

TSS ID:hg_101268.1
Species:human
Chr:chr9
Start:88685486
End:88685490
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation

Transcript_name:
Distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Gene_name:LOC286238
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation

Distance to TSS:-33328
Nearest PromoterID:NM_001100111
Entrez ID:286238
Nearest Unigene:Hs.434185
Nearest Refseq:NM_001100111
Nearest Ensembl:ENSG00000228189
Gene Name:LOC286238
Gene Alias:-
Gene Description:uncharacterized LOC286238
Gene Type:ncRNA
CpG%:0.02
GC%:0.467662
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"-80(CTCTATAAAATG,-,0.00),-44(GGCCATATAAGG,-,0.00),-42(CCATATAAGGGA,+,0.00)"



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