TSS: Hg 101775.1: Difference between revisions

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Line 6: Line 6:
|distance_to_tss=135525
|distance_to_tss=135525
|end=102655166
|end=102655166
|end_of_center_position=102655162
|entrez_id=414319
|entrez_id=414319
|gc_percent=0.517413
|gc_percent=0.517413
|gene_alias=C9orf107|bA785H23.1
|gene_alias=C9orf107
|gene_description=long intergenic non-protein coding RNA 587
|gene_description=long intergenic non-protein coding RNA 587
|gene_name=LINC00587
|gene_name=LINC00587
Line 19: Line 20:
|species=human
|species=human
|start=102655157
|start=102655157
|start_of_center_position=102655161
|strand=-
|strand=-
|tata_box="-35(GGTTTTATAAGG,-,0.00),17(CGCCATATAGGA,-,0.00)"
|tata_box="-35(GGTTTTATAAGG,-,0.00),17(CGCCATATAGGA,-,0.00)"

Revision as of 10:35, 11 May 2019

Basic information about the TSS

TSS ID:hg_101775.1
Species:human
Chr:chr9
Start:102655157
End:102655166
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation

Transcript_name:
Distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Gene_name:LINC00587
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation

Distance to TSS:135525
Nearest PromoterID:NR_103830
Entrez ID:414319
Nearest Unigene:Hs.385790
Nearest Refseq:NR_103830
Nearest Ensembl:ENSG00000204250
Gene Name:LINC00587
Gene Alias:C9orf107
Gene Description:long intergenic non-protein coding RNA 587
Gene Type:ncRNA
CpG%:0.035
GC%:0.517413
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"-35(GGTTTTATAAGG,-,0.00),17(CGCCATATAGGA,-,0.00)"



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