TSS: Hg 102201.1: Difference between revisions

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(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=-69226 |entrez_id=944 |gc_percent=0.457711 |gene_alias=CD153|CD30L|CD30LG|TNLG3A |gene_description=tumor necrosis factor superf...")
 
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{{TSSDetail
{{TSSDetail
|CD30L=
|CD30LG=
|TNLG3A=
|chr=chr9
|cpg_percent=0.005
|cpg_percent=0.005
|distance=
|distance_to_tss=-69226
|distance_to_tss=-69226
|end=114999825
|entrez_id=944
|entrez_id=944
|gc_percent=0.457711
|gc_percent=0.457711
Line 12: Line 18:
|nearest_refseq=NM_001244
|nearest_refseq=NM_001244
|nearest_unigene=Hs.494901
|nearest_unigene=Hs.494901
|num_trans=0
|species=human
|start=114999816
|strand=-
|tata_box="23(GCTTTAAAACAG,+,0.00)"
|tata_box="23(GCTTTAAAACAG,+,0.00)"
|transcript_name=
|tss_classification=no
|tss_id=hg_102201.1
|tss_id=hg_102201.1
|tss_score=1
}}
}}

Revision as of 19:16, 8 March 2018

Basic information about the TSS


TSS ID:hg_102201.1
Species:human
Chr:chr9
Start:114999816
End:114999825
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation


Transcript_name:
Distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Gene_name:TNFSF8
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-69226
Nearest PromoterID:NM_001252290
Entrez ID:944
Nearest Unigene:Hs.494901
Nearest Refseq:NM_001244
Nearest Ensembl:ENSG00000106952
Gene Name:TNFSF8
Gene Alias:CD153
Gene Description:tumor necrosis factor superfamily member 8
Gene Type:protein-coding
CpG%:0.005
GC%:0.457711
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"23(GCTTTAAAACAG,+,0.00)"