TSS: Hg 10002.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=11378 |entrez_id=23463 |gc_percent=0.393035 |gene_alias=HSTE14|MST098|MSTP098|PCCMT|PCMT|PPMT |gene_description=isoprenylcystei...") |
No edit summary |
||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|MST098= | |||
|MSTP098= | |||
|PCCMT= | |||
|PCMT= | |||
|PPMT= | |||
|chr=chr1 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance= | |||
|distance_to_tss=11378 | |distance_to_tss=11378 | ||
|end=6224621 | |||
|entrez_id=23463 | |entrez_id=23463 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
| Line 12: | Line 20: | ||
|nearest_refseq=NM_012405 | |nearest_refseq=NM_012405 | ||
|nearest_unigene=Hs.515688 | |nearest_unigene=Hs.515688 | ||
|num_trans=0 | |||
|species=human | |||
|start=6224590 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_10002.1 | |tss_id=hg_10002.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 16:59, 8 March 2018
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 11378 |
|---|---|
| Nearest PromoterID: | NM_012405 |
| Entrez ID: | 23463 |
| Nearest Unigene: | Hs.515688 |
| Nearest Refseq: | NM_012405 |
| Nearest Ensembl: | ENSG00000116237 |
| Gene Name: | ICMT |
| Gene Alias: | HSTE14 |
| Gene Description: | isoprenylcysteine carboxyl methyltransferase |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |