TSS: Hg 102238.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=80518 |entrez_id=58483 |gc_percent=0.512438 |gene_alias=C9orf27|EST-YD1 |gene_description=long intergenic non-protein coding RNA...") |
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{{TSSDetail | {{TSSDetail | ||
|EST-YD1= | |||
|chr=chr9 | |||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance= | |||
|distance_to_tss=80518 | |distance_to_tss=80518 | ||
|end=115844585 | |||
|entrez_id=58483 | |entrez_id=58483 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_021208 | |nearest_refseq=NM_021208 | ||
|nearest_unigene=Hs.23367 | |nearest_unigene=Hs.23367 | ||
|num_trans=0 | |||
|species=human | |||
|start=115844575 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102238.1 | |tss_id=hg_102238.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:17, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 80518 |
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| Nearest PromoterID: | NR_024032 |
| Entrez ID: | 58483 |
| Nearest Unigene: | Hs.23367 |
| Nearest Refseq: | NM_021208 |
| Nearest Ensembl: | |
| Gene Name: | LINC00474 |
| Gene Alias: | C9orf27 |
| Gene Description: | long intergenic non-protein coding RNA 474 |
| Gene Type: | ncRNA |
| CpG%: | 0.03 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |