Template: TSSDetailV4: Difference between revisions

Revision as of 15:36, 29 June 2023

Basic information about the TSS

TSS ID:	{{{tss_id}}}
Species:
Chr:

Start:
End:
Strand:

TSS cluster detected^*

* The number of TSS cluster called studies (maximum 5)

cCREs annotation

Description:
Category:

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Transcript_name:
Distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:

Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:
Nearest PromoterID:
Entrez ID:
Nearest Unigene:
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Description:
Gene Type:
CpG%:
GC%:
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 146: / Line 146: @@
 <br>
 {{#if:{{{gene_symbol|}}}|<span class="section_head">TSS expression</span><includeonly>{{#gene_exptable:{{{species|}}}|{{{gene_symbol}}} }}</includeonly>| }}
-<html>
-<script type="text/javascript" src="reftss_js/gene_exptable.js"></script></html>
 {{#set:tss_id={{{tss_id}}}}}
 {{#set:species={{{species}}}}}