Template: TSSDetailV4: Difference between revisions

Revision as of 14:18, 11 December 2023

Basic information about the TSS

TSS ID:	{{{tss_id}}}
Species:
Chr:

Start:
End:
Strand:

TSS cluster detected^*

* The number of TSS cluster called studies (maximum 5)

cCREs annotation

Description:
Category:

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Transcript_name:
Distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:

Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:
Nearest PromoterID:
Entrez ID:
Nearest Unigene:
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Description:
Gene Type:
CpG%:
GC%:
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 83: / Line 83: @@
 </table></td><td style="width:4%;"></td><td style="width:48%;">
 <table class="inner" >
-{{#if:{{{tss_id_v3|}}}||<tr><th scope="row" class="item_label_middle">Start:</th><td>{{{start|}}}</td></tr>
+<tr><th scope="row" class="item_label_middle">Start:</th><td>{{{start|}}}</td></tr>
-<tr><th scope="row" class="item_label_middle">End:</th><td>{{{end|}}}</td></tr>}}
+<tr><th scope="row" class="item_label_middle">End:</th><td>{{{end|}}}</td></tr>
 <tr><th scope="row" class="item_label_middle">Strand:</th><td>{{{strand|}}}</td></tr>
 </table>