TSS: Rfhg 100005.1: Difference between revisions
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{{TSSDetailV4 | {{TSSDetailV4 | ||
|all_trans= | |||
|annotation=TTS (NM_001868) | |annotation=TTS (NM_001868) | ||
|ccre_category=N | |ccre_category=N | ||
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|nearest_promoter_id=NM_001868 | |nearest_promoter_id=NM_001868 | ||
|nearest_refseq=NM_001868 | |nearest_refseq=NM_001868 | ||
|nearest_transcripts= | |||
|nearest_unigene=Hs.2879 | |nearest_unigene=Hs.2879 | ||
|peak_score=1 | |peak_score=1 | ||
Revision as of 15:00, 6 November 2024
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | - |
|---|---|
| Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 7521 |
|---|---|
| Nearest PromoterID: | NM_001868 |
| Entrez ID: | 1357 |
| Nearest Unigene: | Hs.2879 |
| Nearest Refseq: | NM_001868 |
| Nearest Ensembl: | ENSG00000091704 |
| Gene Name: | CPA1 |
| Gene Alias: | CPA |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 0.714286 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |