TSS: Rfhg 101037.1: Difference between revisions

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{{TSSDetailV4
{{TSSDetailV4
|all_trans=ENST00000610315.1:-5 ENST00000563442.1:156 ENST00000565468.6:-173 NM_001195278.2:-173
|annotation=5' UTR (NM_001195278, exon 1 of 4)
|annotation=5' UTR (NM_001195278, exon 1 of 4)
|ccre_category=N
|ccre_category=N
Line 25: Line 26:
|nearest_promoter_id=NM_001195278
|nearest_promoter_id=NM_001195278
|nearest_refseq=NM_001195278
|nearest_refseq=NM_001195278
|nearest_transcripts=ENST00000563442.1:156 ENST00000565468.6:-173 NM_001195278.2:-173
|nearest_unigene=Hs.283851
|nearest_unigene=Hs.283851
|peak_score=1
|peak_score=1

Revision as of 15:42, 6 November 2024

Basic information about the TSS


TSS ID:rfhg_101037.1
Species:human
Chr:chr7
Start:141074237
End:141074237
Strand:+
Source datasetsEPD
ProtocolTSS_database
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000610315.1:-5
GeneID:100507421
HGNC/MGI_ID:HGNC:44112
UniProt_ID:A0A087X1B3
Nearer transcript ids and distances:
  • ENST00000563442.1:156
  • ENST00000565468.6:-173
  • NM_001195278.2:-173
view more...
Gene_name:TMEM178B
Gene_symbol:TMEM178B
Gene_synonyms:DKFZp547G036
Gene_source:HGNC:44112



TATA-Box annotation


Distance to TSS:173
Nearest PromoterID:NM_001195278
Entrez ID:100507421
Nearest Unigene:Hs.283851
Nearest Refseq:NM_001195278
Nearest Ensembl:ENSG00000261115
Gene Name:TMEM178B
Gene Alias:-
Gene Type:protein-coding
CpG%:0.000000
GC%:1.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.